STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psiEPhosphate-starvation-inducible protein PsiE; Derived by automated computational analysis using gene prediction method: Protein Homology. (132 aa)    
Predicted Functional Partners:
BG55_15715
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.692
BG55_02850
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.666
BG55_21715
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.619
BG55_07310
DNA polymerase III subunit theta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.614
ompX
Membrane protein; OmpX; involved in cell adhesion; forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface; mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.575
BG55_17720
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.552
BG55_05870
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.545
BG55_18240
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.542
BG55_03390
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.522
BG55_07405
DNA replication terminus site-binding protein; Binds to DNA replication terminator sequences to prevent passage of replication forks; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.521
Your Current Organism:
Erwinia mallotivora
NCBI taxonomy Id: 69222
Other names: ATCC 29573, CFBP 2503, CIP 105197, DSM 4565, E. mallotivora, ICMP 5705, LMG 2708, LMG:2708, NCPPB 2851
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.