STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BG55_11975Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (134 aa)    
Predicted Functional Partners:
BG55_11960
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.810
BG55_11965
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.810
BG55_11970
Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.810
BG55_11945
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.809
BG55_11950
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.809
BG55_11955
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.809
BG55_11940
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.808
BG55_11935
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.799
BG55_11925
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.771
BG55_11930
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.771
Your Current Organism:
Erwinia mallotivora
NCBI taxonomy Id: 69222
Other names: ATCC 29573, CFBP 2503, CIP 105197, DSM 4565, E. mallotivora, ICMP 5705, LMG 2708, LMG:2708, NCPPB 2851
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.