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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANY20535.1Hypothetical protein. (153 aa)    
Predicted Functional Partners:
ANY20534.1
Gram-negative bacterial tonB protein.
       0.639
ANY18764.1
Hypothetical protein.
 
     0.580
recG
ATP-dependent DNA helicase RecG.
       0.512
ddc
L-2,4-diaminobutyrate decarboxylase.
       0.448
copB
Copper resistance protein B precursor.
 
   
 0.445
thyA
Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.
       0.444
Your Current Organism:
Altererythrobacter dongtanensis
NCBI taxonomy Id: 692370
Other names: A. dongtanensis, Altererythrobacter dongtanensis Fan et al. 2011, Altererythrobacter sp. JM27, CCTCC AB 209199, KCTC 22672, strain JM27
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