STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMD31945.1Predicted kinase, aminoglycoside phosphotransferase (APT) family. (361 aa)    
Predicted Functional Partners:
SMD31944.1
Acyl-CoA dehydrogenase.
  0.995
SMD39112.1
NADPH2:quinone reductase.
  
  0.785
SMD32623.1
butyryl-CoA dehydrogenase.
  
  0.754
SMD37734.1
butyryl-CoA dehydrogenase.
  
  0.748
SMD31886.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
   0.733
SMD34000.1
Acyl-CoA dehydrogenase.
 
 
  0.709
SMD36781.1
Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
    0.595
SMD36398.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.586
SMD32440.1
SnoaL-like domain-containing protein.
  
     0.512
SMD34790.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.506
Your Current Organism:
Reichenbachiella faecimaris
NCBI taxonomy Id: 692418
Other names: DSM 26133, JCM 16588, KACC 14523, R. faecimaris, Reichenbachiella faecimaris Cha et al. 2011, Reichenbachiella sp. PCP104, Reichenbachiella sp. PCP11, strain PCP11
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