STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
serSseryl-tRNA synthetase. (425 aa)    
Predicted Functional Partners:
argS
arginyl-tRNA synthetase.
  
 
 0.960
hisS
histidyl-tRNA synthetase.
 
 
 0.859
cysS
cysteinyl-tRNA synthetase.
 
 
 0.848
valS
valyl-tRNA synthetase.
 
  
 0.825
gltX
glutamyl-tRNA synthetase.
 
  
 0.812
baeJ
Bacillaene synthesis; hybrid NRPS/PKS protein.
   
   0.776
baeM
Bacillaene synthesis; polyketide synthase of type I.
   
   0.776
infB
Initiation factor IF-2.
 
  
 0.768
thrZ
threonyl-tRNA synthetase.
  
 
 0.748
ileS
isoleucyl-tRNA synthetase.
 
  
 0.746
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.