STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpsKRibosomal protein S11 (BS11). (131 aa)    
Predicted Functional Partners:
rpsL
Ribosomal protein S12 (BS12).
 
 0.999
rpsG
Ribosomal protein S7 (BS7).
 
 0.999
rpsJ
Ribosomal protein S10 (BS13).
 
 0.999
rplB
Ribosomal protein L2 (BL2).
 
 
 0.999
rpsS
Ribosomal protein S19 (BS19).
 
 0.999
rpsC
Ribosomal protein S3 (BS3).
 
 0.999
rplP
Ribosomal protein L16.
 
 
 0.999
rpsQ
Ribosomal protein S17 (BS16).
 
 0.999
rplNA
Ribosomal protein L14.
 
 0.999
rplE
Ribosomal protein L5 (BL6).
 
 
 0.999
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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