STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gabT14-aminobutyrate aminotransferase; Glutamate-1-semialdehyde 2,1-aminomutase; GSA; Glutamate-1-semialdehyde aminotransferase; GSA-AT;, Aminotransferase class-III, Aminotransferase class-III, no ortholog in B. subtilis, argD: acetylornithine and succinylornithine aminotransferases. (422 aa)    
Predicted Functional Partners:
yktc1
Probable inorganic polyphosphate/ATP-NAD kinase; Poly(P)/ATP NAD kinase;, Inositol monophosphatase, no ortholog in B. subtilis.
 
  
 0.983
gutB1
L-threonine 3-dehydrogenase;, Alcohol dehydrogenase superfamily, zinc-containing, Alcohol dehydrogenase GroES-like domain, tdh: L-threonine 3-dehydrogenase.
  
 
 0.983
ituA
Iturin A synthetase A (B. subtilis); 'other functions; Antibiotic production; Nonribosomal synthesis of iturinA'.
  
  
 0.858
baeJ
Bacillaene synthesis; hybrid NRPS/PKS protein.
  
 
 0.837
baeM
Bacillaene synthesis; polyketide synthase of type I.
  
 
 0.829
yugT
Putative oligo-1,6-glucosidase.
      
 0.768
glcP1
Bypass of stop codon protein 6;, Major facilitator superfamily MFS-1, Major Facilitator Superfamily, no ortholog in B. subtilis.
     
 0.745
gltA
Glutamate synthase (large subunit).
      
 0.700
folD
Methylenetetrahydrofolate dehydrogenase; methenyltetrahydrofolate cyclohydrolase.
     
 0.655
gabD
Succinate-semialdehyde dehydrogenase.
  
 0.634
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.