STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yktc1Probable inorganic polyphosphate/ATP-NAD kinase; Poly(P)/ATP NAD kinase;, Inositol monophosphatase, no ortholog in B. subtilis. (316 aa)    
Predicted Functional Partners:
gabT1
4-aminobutyrate aminotransferase; Glutamate-1-semialdehyde 2,1-aminomutase; GSA; Glutamate-1-semialdehyde aminotransferase; GSA-AT;, Aminotransferase class-III, Aminotransferase class-III, no ortholog in B. subtilis, argD: acetylornithine and succinylornithine aminotransferases.
 
  
 0.983
gutB1
L-threonine 3-dehydrogenase;, Alcohol dehydrogenase superfamily, zinc-containing, Alcohol dehydrogenase GroES-like domain, tdh: L-threonine 3-dehydrogenase.
  
  
 0.979
iolG
Inositol 2-dehydrogenase; 'intermediary metabolism; Metabolism of carbohydrates and related molecules; Specific pathways', myo-inositol catabolism.
  
 
 0.905
suhB
Inositol monophosphatase.
     
  0.900
yugT
Putative oligo-1,6-glucosidase.
      
 0.769
nusA
Transcription translation coupling factor involved in Rho-dependent transcription termination.
   
   0.706
glcP1
Bypass of stop codon protein 6;, Major facilitator superfamily MFS-1, Major Facilitator Superfamily, no ortholog in B. subtilis.
     
 0.690
rpoZ
Omega subunit of RNA polymerase.
   
   0.677
rpoC
RNA polymerase (beta' subunit).
    
 
 0.672
rpoB
RNA polymerase (beta subunit).
    
   0.669
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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