STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yczEIntegral inner membrane protein regulating antibiotic production. (203 aa)    
Predicted Functional Partners:
sfp
N-terminal part of 4'-phosphopantetheinyl transferase (Surfactin synthetase-activating enzyme).
     
 0.923
yitT
Putative integral inner membrane protein.
      
 0.592
yusV
iron(III)-siderophore transporter (ATP binding component).
      
 0.583
tcyC
Phosphate import ATP-binding protein pstB; Phosphate-transporting ATPase; ABC phosphate transporter;, ABC transporter-like, ABC transporter, ectoine_ehuA: ectoine/hydroxyectoine ABC transporter, ATP-binding protein.
     
 0.518
tcyB
Inner membrane amino-acid ABC transporter permease protein yecS;, Binding-protein-dependent transport systems inner membrane component, Binding-protein-dependent transport system inner membrane component, HEQRo_perm_3TM: amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.
     
 0.508
tcyA
Cystine ABC transporter (binding protein); Probable amino-acid ABC transporter-binding protein HI1080; Flags: Precursor;, Extracellular solute-binding protein, family 3, Bacterial extracellular solute-binding proteins, family 3, 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein.
     
 0.508
pabB
4-amino-4-deoxychorismate synthase (para-aminobenzoate synthase).
      
 0.506
bsdA
Transcriptional activator of the ''bsdB-bsdC-bsdD'' operon; Uncharacterized HTH-type transcriptional regulator ywbI;, LysR, substrate-binding, LysR substrate binding domain.
     
 0.471
yfhP
Putative membrane hydrolase.
      
 0.452
yvsG
Putative membrane hydrolase.
      
 0.452
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
Server load: medium (42%) [HD]