STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glcUGlucose permease. (287 aa)    
Predicted Functional Partners:
gdh
Glucose 1-dehydrogenase.
 
  
 0.958
ptsG
Phosphotransferase system (PTS) glucose-specific enzyme IICBA component.
      
 0.617
bioB
Biotin synthase.
  
    0.586
ptsI
Phosphotransferase system (PTS) enzyme I.
      
 0.552
dltB
Putative D-alanine esterase for lipoteichoic acid and wall teichoic acid.
  
   
 0.512
ptsH
Histidine-containing phosphocarrier protein of the phosphotransferase system (PTS) (HPr protein).
      
 0.489
ribD
Fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase.
       0.474
gabD
Succinate-semialdehyde dehydrogenase.
       0.473
dltD
Putative D-alanine esterase for lipoteichoic acid and wall teichoic acid synthesis.
  
   
 0.466
pstS
Phosphate ABC transporter (binding lipoprotein).
  
   
 0.457
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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