STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xhlA1Phage related protein; Uncharacterized 10.1 kDa protein in ORF3 5'region;, Haemolysin XhlA. (92 aa)    
Predicted Functional Partners:
xhlB1
Uncharacterized 9.5 kDa protein in ORF3 5'region;, Holin, SPP1, Phage lysis protein, holin, holin_SPP1: holin, SPP1 family.
  
  
 0.920
xkdF
Conserved hypothetical protein; putative PBSX prophage protein.
   
   0.739
xlyA1
Bacteriophage PBSX N-acetylmuramoyl-L-alanine amidase.
   
  
 0.735
xlyA3
N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramoyl-L-alanine amidase blyA; Cell wall hydrolase; Autolysin;, N-acetylmuramoyl-L-alanine amidase, family 2, N-acetylmuramoyl-L-alanine amidase.
   
  
 0.735
xhlB3
Bacteriophage PBSX holin; Holin;, Holin, SPP1, Phage lysis protein, holin, holin_SPP1: holin, SPP1 family.
  
  
 0.716
xhlB5
XhlB; 'other functions; Phage-related functions'.
  
  
 0.716
xlyB3
N-acetylmuramoyl-L-alanine amidase xlyB; Cell wall hydrolase; Autolysin; Flags: Precursor;, N-acetylmuramoyl-L-alanine amidase, family 2, N-acetylmuramoyl-L-alanine amidase.
  
  
 0.714
xkdI
Conserved hypothetical protein; putative PBSX prophage protein.
   
    0.687
xkdG
Putative capsid protein of PBSX prophage.
   
    0.618
yqbE
Uncharacterized protein yqbE.
   
    0.618
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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