STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAMF_0724Cell wall anchor domain-containing protein; Apolipophorins; Retinoid-and fatty acid-binding glycoprotein; Contains: RecName: Full=Apolipophorin-2; Apolipophorin II; ApoL2; Contains: RecName: Full=Apolipophorin-1; Apolipophorin I; ApoL1; Flags: Precursor;, Fibrogen-binding, domain 1, Cna protein B-type domain. (1970 aa)    
Predicted Functional Partners:
ywpE
Similar to sortase; Peptidase C60, sortase A/B, Sortase family.
 
   
 0.845
ywpD
Putative two-component sensor histidine kinase.
 
   
 0.787
BAMF_0723
Putative response regulator in two-component regulatory system; Chemotaxis response regulator protein-glutamate methylesterase 1;, Signal transduction response regulator, receiver region, Response regulator receiver domain.
 
     0.769
BAMF_0955
Phage minor structural protein, N-terminal, Protein of unknown function (DUF1142).
  
     0.650
glsB
Glutaminase.
      
 0.593
sacB
Levansucrase.
  
   
 0.579
des
Fatty acid desaturase.
      
 0.549
yvdC
Putative pyrophosphohydrolase.
  
     0.448
ylaI
Conserved hypothetical protein.
  
     0.438
gltC
Transcriptional regulator (LysR family).
  
   
 0.413
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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