STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAMF_0855Hypothetical protein predicted by Glimmer/Critica. (44 aa)    
Predicted Functional Partners:
yqbO1
Talin-B;, Phage tail tape measure protein TP901, core region, tape_meas_TP901: phage tail tape measure protein, TP901 family, core region.
       0.732
gp17
Phage sipho_tail superfamily; Protein of unknown function DUF1306, Protein of unknown function (DUF1306).
       0.732
gp18
Phage minor structural protein; Protein of unknown function DUF1142, Protein of unknown function (DUF1142).
       0.721
BAMF_0859
Phage related protein.
       0.721
RBAM_026730
Lj928 prophage protein RBAM_026730; Esterase, SGNH hydrolase-type, subgroup.
       0.721
gp24
Phage infection protein.
       0.683
BAMF_0862
Phage-like protein.
       0.683
BAMF_0863
Phage uncharacterised protein XkdX.
       0.683
BAMF_0854
Hypothetical protein predicted by Glimmer/Critica.
       0.664
bhlA1
SPBc2 prophage-derived protein bhlA.
       0.578
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.