STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAMF_0902Hypothetical protein predicted by Glimmer/Critica. (420 aa)    
Predicted Functional Partners:
BAMF_0901
Hypothetical protein predicted by Glimmer/Critica.
       0.803
BAMF_0900
Hypothetical protein predicted by Glimmer/Critica.
       0.774
polA1
DNA polymerase I; POL I;, DNA-directed DNA polymerase, family A, palm domain, 3'-5' exonuclease, pola: DNA polymerase I.
       0.514
BAMF_0903
Hypothetical protein predicted by Glimmer/Critica.
       0.480
BAMF_0906
Hypothetical protein predicted by Glimmer/Critica.
       0.467
BAMF_0899
Hypothetical protein predicted by Glimmer/Critica.
       0.427
BAMF_0908
Hypothetical protein predicted by Glimmer/Critica; Crossover junction endodeoxyribonuclease RuvC.
       0.423
BAMF_0905
Hypothetical protein predicted by Glimmer/Critica.
       0.417
BAMF_0907
Hypothetical protein predicted by Glimmer/Critica.
       0.417
BAMF_0909
Hypothetical protein predicted by Glimmer/Critica.
       0.417
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.