STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glpFGlycerol facilitator; Aquaporin-4; AQP-4;, Major intrinsic protein, Major intrinsic protein, MIP: MIP family channel proteins. (276 aa)    
Predicted Functional Partners:
glpK
Glycerol kinase.
 
 
 0.995
glpD
Glycerol-3-phosphate oxidase.
  
 0.981
glpP
Glycerol-3-phosphate responding transcription antiterminator.
 
    0.872
gmk
Guanylate kinase.
      
 0.781
ilvD
Dihydroxy-acid dehydratase.
      
 0.773
prpC1
Phosphorylated protein phosphatase.
    
 
 0.765
tpiA
Triose phosphate isomerase.
   
 
 0.761
purH
Fused phosphoribosylaminoimidazole carboxy formyl formyltransferase; inosine-monophosphate cyclohydrolase.
     
 0.751
pycA
Pyruvate carboxylase.
      
 0.723
sigA
RpoD; 'information pathways; RNA synthesis; Initiation'.
      
 0.723
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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