STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtnAMethylthioribose-1-phosphate isomerase (methionine salvage pathway). (353 aa)    
Predicted Functional Partners:
mtnK
Methylthioribose kinase (methionine salvage pathway).
 
 0.999
mtnB
Methylthioribulose-1-phosphate dehydratase (MTRu-1-P dehydratase).
 
 0.998
mtnD
Acireductone dioxygenase; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; DHK-MTPene dioxygenase; Acireductone dioxygenase (Ni(2+)-requiring); Ni-ARD; ARD; Acireductone dioxygenase (Fe(2+)-requiring); Fe-ARD; ARD';, Cupin, RmlC-type, ARD/ARD' family.
 
 
 0.951
mtnW
2, 3-diketo-5-methylthiopentyl-1-phosphateenolase.
 
  
 0.919
ylmD
Conserved hypothetical protein.
    
  0.902
mtnE
Methionine-glutamine aminotransferase.
 
  
 0.868
yitJ
Methionine synthase / methylenetetrahydrofolate reductase(NADPH); Homocysteine S-methyltransferase using (R,S)AdoMet and methylenetetrahydrofolate reductase [NAD(P)H].
   
  
 0.851
rpe
Ribulose-5-phosphate 3-epimerase.
  
   0.646
speE
Spermidine synthase; polyamine metabolism.
 
  
 0.608
mtnN
Methylthioadenosine / S-adenosylhomocysteine nucleosidase.
      
 0.606
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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