STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
queFNitrile reductase; 'unknown; Similar to unknown proteins from B. subtilis'. (164 aa)    
Predicted Functional Partners:
queC
QueC; 'other functions; Detoxification'.
 
 
 0.999
queE
QueE; 'intermediary metabolism; Metabolism of coenzymes and prosthetic groups'.
 
  
 0.997
queD
6-pyruvoyltetrahydropterin synthase; 'intermediary metabolism; Metabolism of coenzymes and prosthetic groups'.
 
  
 0.993
tgt
tRNA-guanine transglycosylase.
    
 0.815
ribAB
Fused GTP cyclohydrolase II and 3,4-dihydroxy-2-butanone 4-phosphate synthase.
     
 0.798
thiM
Hydroxyethylthiazole kinase.
      
 0.792
thrS
threonyl-tRNA synthetase.
      
 0.782
ypdP
Putative integral inner membrane protein.
  
  
 0.776
fer
Ferredoxin.
     
 0.679
queA
S-adenosylmethionine tRNA ribosyltransferase-isomerase.
  
  
 0.660
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.