STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gmkGuanylate kinase. (204 aa)    
Predicted Functional Partners:
ylzA
Conserved hypothetical protein.
 
    0.986
guaA
GMP synthetase.
 
 
 0.982
hprT
Hypoxanthine-guanine phosphoribosyltransferase.
   
 
 0.965
rpoZ
Omega subunit of RNA polymerase.
  
  
 0.959
xpt
Xanthine phosphoribosyltransferase.
  
 
 0.957
purB
Adenylosuccinate lyase.
 
 
 0.931
relA
GTP pyrophosphokinase (RelA/SpoT).
  
 
 0.930
guaC
GMP reductase.
 
  
 0.926
dgk
Deoxyguanosine kinase.
     
 0.921
ndk
Nucleoside diphosphate kinase.
   
 0.921
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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