STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fabG1Beta-ketoacyl-acyl carrier protein reductase. (246 aa)    
Predicted Functional Partners:
fabD
Malonyl CoA:acyl carrier protein transacylase.
 
 0.983
fabF
Beta-ketoacyl-acyl carrier protein synthase II.
 
 0.980
fabHA
3-oxoacyl-[acyl-carrier-protein] synthase 3; 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III;, Beta-ketoacyl-acyl carrier protein synthase III (FabH), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal, fabH: 3-oxoacyl-(acyl-carrier-protein) synthase III.
 
 
 0.969
fabZ
(3R)-hydroxymyristoyl-ACP dehydratase; 'intermediary metabolism; Metabolism of lipids'.
 
 0.968
RBAM_006010
3-oxoacyl-[acyl-carrier-protein] synthase 2; 3-oxoacyl-[acyl-carrier-protein] synthase II; Beta-ketoacyl-ACP synthase II; KAS II;, Beta-ketoacyl synthase, Beta-ketoacyl synthase, N-terminal domain.
 
  0.967
fabHB
3-oxoacyl-(acyl-carrier-protein) synthase III, putative; 3-oxoacyl-[acyl-carrier-protein] synthase 3; 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III;, Beta-ketoacyl-acyl carrier protein synthase III (FabH), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal, fabH: 3-oxoacyl-(acyl-carrier-protein) synthase III.
 
 
 0.957
plsX
phosphate:acyl-ACP acyltransferase.
  
  
 0.921
fapR
Transcription factor.
  
  
 0.870
acpA
Acyl carrier protein.
 
  0.735
ituA
Iturin A synthetase A (B. subtilis); 'other functions; Antibiotic production; Nonribosomal synthesis of iturinA'.
  
 0.735
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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