STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
baeCmalonyl-CoA-acyltransferase involved in bacillaene synthesis. (289 aa)    
Predicted Functional Partners:
baeM
Bacillaene synthesis; polyketide synthase of type I.
 0.991
baeJ
Bacillaene synthesis; hybrid NRPS/PKS protein.
 
 0.987
baeR
Bacillaene synthesis; polyketide synthase of type I.
 0.981
baeL3
Bacillaene synthesis; Putative polyketide synthase pksM;, Beta-ketoacyl synthase, Beta-ketoacyl synthase, N-terminal domain.
 
 0.980
fabF
Beta-ketoacyl-acyl carrier protein synthase II.
 
 0.974
RBAM_006010
3-oxoacyl-[acyl-carrier-protein] synthase 2; 3-oxoacyl-[acyl-carrier-protein] synthase II; Beta-ketoacyl-ACP synthase II; KAS II;, Beta-ketoacyl synthase, Beta-ketoacyl synthase, N-terminal domain.
 
 0.969
pksF1
Putative polyketide beta-ketoacyl synthase;, Beta-ketoacyl synthase, Beta-ketoacyl synthase, C-terminal domain.
 
 0.964
ituA
Iturin A synthetase A (B. subtilis); 'other functions; Antibiotic production; Nonribosomal synthesis of iturinA'.
 
 0.957
acpK
Bacillaene synthesis; acyl-carrier protein.
 
 0.950
baeL1
Bacillaene synthesis; polyketide synthase of type I.
 
 0.902
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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