STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAMF_1966Protein of unknown function DUF1657, Protein of unknown function (DUF1657). (68 aa)    
Predicted Functional Partners:
BAMF_1961
UPF0702 transmembrane protein ykjA; ORF3;, Protein of unknown function DUF421, Protein of unknown function (DUF421).
 
     0.814
BAMF_1843
UPF0702 transmembrane protein ykjA; ORF3;, Protein of unknown function DUF421, Protein of unknown function (DUF421).
 
     0.741
BAMF_3822
UPF0702 transmembrane protein ykjA; ORF3;, Protein of unknown function DUF421, Protein of unknown function (DUF421).
 
     0.741
BAMF_1965
Sporulation lipoprotein YhcN/YlaJ-like.
 
     0.662
spoVAD3
Stage V sporulation AD, Stage V sporulation protein AD (SpoVAD), spore_V_AD: stage V sporulation protein AD.
 
     0.650
spoVAC3
Sporulation stage V, protein AC, SpoVA protein, spore_V_AC: stage V sporulation protein AC.
 
     0.646
ytrH
Membrane protein involved in a sporulation process; 'unknown; Similar to unknown proteins from other organisms'.
  
     0.552
spoVAE3
Sporulation stage V, protein AE, SpoVA protein, spore_V_AE: stage V sporulation protein AE.
       0.539
spoIIM
Autolysin component for dissolution of the septal cell wall (stage II sporulation).
  
     0.512
yojO
Putative activator of nitric oxide reductase.
  
     0.434
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
Server load: medium (78%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.