STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhaSDhaS; 'intermediary metabolism; Metabolism of coenzymes and prosthetic groups'. (495 aa)    
Predicted Functional Partners:
aldX
Retinal dehydrogenase 1; RALDH 1; RalDH1; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; ALHDII; ALDH-E1;, Aldehyde dehydrogenase, Aldehyde dehydrogenase family, SSADH: succinic semialdehyde dehydrogenase.
  
  
0.929
gabT
4-aminobutyrate aminotransferase.
  
 0.926
mmsA
Methylmalonate-semialdehyde dehydrogenase.
  
  
 
0.917
yetO
Putative cytochrome P450 CYP102A2.
   
 0.915
cypB
Cytochrome P450 CYP102A3.
   
 0.915
adhA
Putative dehydrogenase.
  
 0.913
RBAM017440
RBAM017440; 'putative NADP-dependent alcohol dehydrogenase'.
  
 0.913
acsA
acetyl-CoA synthetase.
   
 0.913
ykwC
Putative beta-hydroxyacid dehydrogenase.
  
 
 0.912
RBAM_003560
Putative glutathione-dependent formaldehyde dehydrogenase; Alcohol dehydrogenase 1; Alcohol dehydrogenase subunit alpha; ADH3;, Alcohol dehydrogenase superfamily, zinc-containing, Alcohol dehydrogenase GroES-like domain, fdhA_non_GSH: formaldehyde dehydrogenase, glutathione-independent.
  
 0.910
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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