STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
norMMatE Na+-driven efflux family protein. (453 aa)    
Predicted Functional Partners:
rsbRC
RsbR paralog; 'other functions; Adaptation to atypical conditions'.
  
    0.772
ykkD
Efflux transporter.
      
 0.603
ebrB
Small multidrug efflux transporter.
      
 0.601
ebrA
Small multidrug resistance efflux transporter.
      
 0.601
yisP
Putative squalene/phytoene synthase.
   
  
 0.598
ypfD
RNA degradation presenting factor (ribosomal protein S1 homolog).
  
    0.535
yoeA
Putative efflux transporter.
 
   
0.520
ykkC
Efflux transporter.
      
 0.508
gapB
Glyceraldehyde-3-phosphate dehydrogenase.
   
  
 0.477
gapA
Glyceraldehyde-3-phosphate dehydrogenase.
   
  
 0.477
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.