STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
norMMatE Na+-driven efflux family protein. (453 aa)    
Predicted Functional Partners:
rsbRC
RsbR paralog; 'other functions; Adaptation to atypical conditions'.
  
    0.771
yisP
Putative squalene/phytoene synthase.
   
 
 0.674
ykkD
Efflux transporter.
   
  
 0.642
ebrA
Small multidrug resistance efflux transporter.
   
  
 0.639
rnc
Ribonuclease III.
   
 
  0.638
ebrB
Small multidrug efflux transporter.
   
  
 0.605
ypfD
RNA degradation presenting factor (ribosomal protein S1 homolog).
   
    0.556
ykkC
Efflux transporter.
   
  
 0.516
gapB
Glyceraldehyde-3-phosphate dehydrogenase.
   
  
 0.477
gapA
Glyceraldehyde-3-phosphate dehydrogenase.
   
  
 0.477
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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