STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ilvAThreonine dehydratase. (422 aa)    
Predicted Functional Partners:
ilvB
Acetolactate synthase (acetohydroxy-acid synthase) (large subunit).
 
 0.988
leuB
3-isopropylmalate dehydrogenase.
 
 0.987
ilvH
Acetolactate synthase (acetohydroxy-acid synthase) (small subunit).
 
 0.978
ybgE
Branched-chain-amino-acid aminotransferase;, Branched-chain amino acid aminotransferase II, Aminotransferase class IV, ilvE_II: branched-chain amino acid aminotransferase.
  
 0.965
ilvD
Dihydroxy-acid dehydratase.
 
 
 0.964
thrC
Threonine synthase.
  
 
0.949
alsS
Alpha-acetolactate synthase.
  
 0.940
ilvC
Acetohydroxy-acid isomeroreductase.
 
  
 0.938
sdaAB
L-serine dehydratase (beta chain).
  
 
 0.937
trpB
Tryptophan synthase (beta subunit).
  
 0.933
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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