STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
resETwo-component sensor histidine kinase. (593 aa)    
Predicted Functional Partners:
resD
Two-component response regulator.
 0.999
spaR
Transcriptional regulatory protein yycF;, Signal transduction response regulator, receiver region, Response regulator receiver domain, PhoB: phosphate regulon transcriptional regulatory protein PhoB.
 
 
 0.895
resC
Factor required for cytochrome c synthesis.
 
  
 0.872
phoP
Two-component response regulator.
 
 0.850
resB
Factor required for cytochrome c synthesis.
 
    0.844
resA
Extracytoplasmic thioredoxin involved in cytochrome c maturation (lipoprotein).
  
  
 0.833
walR
Transcriptional regulatory protein walR;, CheY-like, Response regulator receiver domain, PhoB: phosphate regulon transcriptional regulatory protein PhoB.
 
 0.809
RBAM_032050
Uncharacterized transcriptional regulatory protein RBAM_032050, Signal transduction response regulator, receiver region, Response regulator receiver domain, PhoB: phosphate regulon transcriptional regulatory protein PhoB.
 
 
 0.753
yclJ
Two-component response regulator [YclK].
 
 
 0.737
yvrHb
Transcriptional regulatory protein yvrH;, Signal transduction response regulator, receiver region, Response regulator receiver domain, PhoB: phosphate regulon transcriptional regulatory protein PhoB.
 
 
 0.697
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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