STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
comGFComponent of the DNA transport platform. (166 aa)    
Predicted Functional Partners:
comGG
Component of the DNA transport platform.
  
  
 0.980
comGA
Membrane associated factor for DNA competence.
  
  
 0.914
comGD
Membrane component of the DNA transport platform.
  
  
 0.903
comGC
Pilin-like component of the DNA transport membrane platform.
  
  
 0.903
comGB
Membrane platform component of the DNA transport machinery.
  
  
 0.899
yqzE
Conserved hypothetical protein; 18: Unknown function.
  
    0.801
comFB
ComF operon protein 2;, Late competence development protein ComFB.
   
  
 0.743
comEC
DNA channel for uptake in competent cells.
   
  
 0.698
comEA
Membrane bound high-affinity DNA-binding receptor.
   
  
 0.662
comK
Competence transcription factor (CTF).
   
  
 0.637
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.