STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sdaCheck point factor coupling initiation of sporulation and replication initiation. (46 aa)    
Predicted Functional Partners:
yhdB
Conserved hypothetical protein.
  
     0.770
ytzH
Conserved hypothetical protein.
  
     0.769
RBAM_021630
RBAM_021630; 'unknown; Similar to unknown proteins from other organisms'.
  
     0.767
yhaI
Conserved hypothetical protein.
  
     0.764
yqfT
Conserved hypothetical protein.
  
     0.763
comER
Putative pyrroline-5'-carboxylate reductase.
      
 0.763
gerPE
Probable spore germination protein gerPE.
  
     0.755
yhaL
Sporulation factor.
  
     0.741
yfkD
Conserved hypothetical protein.
  
     0.738
yutH
Spore coat-associated protein.
  
     0.733
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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