Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cmk | engA | BAMF_2190 | BAMF_2185 | Cytidylate kinase. | GTPase essential for ribosome 50S subunit assembly. | 0.986 |
| cmk | rsmB | BAMF_2190 | BAMF_1646 | Cytidylate kinase. | RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent. | 0.509 |
| cmk | spcB | BAMF_2190 | BAMF_2220 | Cytidylate kinase. | Chromosome condensation and segregation factor. | 0.818 |
| cmk | ytzG | BAMF_2190 | BAMF_2802 | Cytidylate kinase. | Putative 16S pseudouridylate synthase; 'information pathways; RNA modification'. | 0.809 |
| engA | cmk | BAMF_2185 | BAMF_2190 | GTPase essential for ribosome 50S subunit assembly. | Cytidylate kinase. | 0.986 |
| engA | rplU | BAMF_2185 | BAMF_2602 | GTPase essential for ribosome 50S subunit assembly. | Ribosomal protein L21 (BL20). | 0.466 |
| engA | spcB | BAMF_2185 | BAMF_2220 | GTPase essential for ribosome 50S subunit assembly. | Chromosome condensation and segregation factor. | 0.692 |
| engA | truB | BAMF_2185 | BAMF_1738 | GTPase essential for ribosome 50S subunit assembly. | tRNA pseudouridine 55 synthase. | 0.527 |
| engA | ytzG | BAMF_2185 | BAMF_2802 | GTPase essential for ribosome 50S subunit assembly. | Putative 16S pseudouridylate synthase; 'information pathways; RNA modification'. | 0.767 |
| exoAA | truB | BAMF_3901 | BAMF_1738 | Apurinic/apyrimidinic endonuclease. | tRNA pseudouridine 55 synthase. | 0.767 |
| exoAA | ytzG | BAMF_3901 | BAMF_2802 | Apurinic/apyrimidinic endonuclease. | Putative 16S pseudouridylate synthase; 'information pathways; RNA modification'. | 0.777 |
| rplU | engA | BAMF_2602 | BAMF_2185 | Ribosomal protein L21 (BL20). | GTPase essential for ribosome 50S subunit assembly. | 0.466 |
| rplU | rsmB | BAMF_2602 | BAMF_1646 | Ribosomal protein L21 (BL20). | RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent. | 0.714 |
| rplU | ytzG | BAMF_2602 | BAMF_2802 | Ribosomal protein L21 (BL20). | Putative 16S pseudouridylate synthase; 'information pathways; RNA modification'. | 0.500 |
| rsmB | cmk | BAMF_1646 | BAMF_2190 | RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent. | Cytidylate kinase. | 0.509 |
| rsmB | rplU | BAMF_1646 | BAMF_2602 | RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent. | Ribosomal protein L21 (BL20). | 0.714 |
| rsmB | trmB | BAMF_1646 | BAMF_2790 | RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent. | tRNA (guanine-N(7)-)-methyltransferase. | 0.656 |
| rsmB | truB | BAMF_1646 | BAMF_1738 | RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent. | tRNA pseudouridine 55 synthase. | 0.896 |
| rsmB | ytzG | BAMF_1646 | BAMF_2802 | RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent. | Putative 16S pseudouridylate synthase; 'information pathways; RNA modification'. | 0.541 |
| spcB | cmk | BAMF_2220 | BAMF_2190 | Chromosome condensation and segregation factor. | Cytidylate kinase. | 0.818 |
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