STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
melAalpha-D-galactoside galactohydrolase. (432 aa)    
Predicted Functional Partners:
yugT
Putative oligo-1,6-glucosidase.
     
 0.916
ycdG
General stress protein, similar to oligo-1,6-glucosidase; Glucan 1,6-alpha-glucosidase; Dextran glucosidase; Exo-1,6-alpha-glucosidase; Glucodextranase;, Glycoside hydrolase, subgroup, catalytic core, Alpha amylase, catalytic domain, trehalose_treC: alpha,alpha-phosphotrehalase.
     
 0.903
RBAM_031820
Sucrose-6-phosphate hydrolase; 'intermediary metabolism; Metabolism of carbohydrates and related molecules; Main glycolytic pathways'.
   
 
 0.903
sacA
Sucrase-6-phosphate hydrolase.
   
 
 0.903
yoxA
Putative epimerase.
     
  0.900
msmE
Multiple sugar-binding lipoprotein.
 
    0.860
amyC
Maltose and multiple sugars ABC transporter (permease).
 
    0.840
amyD
Carbohydrate ABC transporter (permease).
 
    0.809
msmR
Transcriptional regulator (LacI family).
  
  
 0.619
acuB
Component of the acetoin degradation regulation pathway.
   
  
 0.505
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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