STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
melAalpha-D-galactoside galactohydrolase. (432 aa)    
Predicted Functional Partners:
yugT
Putative oligo-1,6-glucosidase.
     
 0.909
RBAM_031820
Sucrose-6-phosphate hydrolase; 'intermediary metabolism; Metabolism of carbohydrates and related molecules; Main glycolytic pathways'.
   
 
 0.907
sacA
Sucrase-6-phosphate hydrolase.
   
 
 0.907
ycdG
General stress protein, similar to oligo-1,6-glucosidase; Glucan 1,6-alpha-glucosidase; Dextran glucosidase; Exo-1,6-alpha-glucosidase; Glucodextranase;, Glycoside hydrolase, subgroup, catalytic core, Alpha amylase, catalytic domain, trehalose_treC: alpha,alpha-phosphotrehalase.
     
 0.906
araA
L-arabinose isomerase.
   
 
  0.901
yoxA
Putative epimerase.
     
  0.900
amyC
Maltose and multiple sugars ABC transporter (permease).
 
    0.877
msmE
Multiple sugar-binding lipoprotein.
 
    0.859
amyD
Carbohydrate ABC transporter (permease).
 
    0.829
msmR
Transcriptional regulator (LacI family).
  
  
 0.629
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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