STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yuiFAmino acid transporter. (442 aa)    
Predicted Functional Partners:
lysP
Y+L amino acid transporter 2; y(+)L-type amino acid transporter 2; y+LAT-2; Y+LAT2; Solute carrier family 7 member 6;, Amino acid/polyamine transporter I, 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family.
   
  
 0.746
yvbW
Putative amino acid permease.
   
  
 0.727
braB
Branched-chain amino acid-Na+ symporter.
      
 0.720
metP
Methionine ABC transporter, permease; 'cell envelope and cellular processes; Transport/binding proteins and lipoproteins'.
      
 0.691
tcyP
L-cystine uptake protein tcyP; Transporter of cystine tcyP;, Sodium:dicarboxylate symporter, Sodium:dicarboxylate symporter family.
      
 0.649
speD
S-adenosylmethionine decarboxylase.
      
 0.640
pepA
Leucyl aminopeptidase.
       0.560
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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