STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frlDFrlD; 'intermediary metabolism; Metabolism of amino acids and related molecules'. (284 aa)    
Predicted Functional Partners:
frlN
FrlN; 'cell envelope and cellular processes; Transport/binding proteins and lipoproteins'.
 
  
 0.989
frlB
FrlB; 'intermediary metabolism; Metabolism of amino acids and related molecules'.
 
  
 0.988
frlM
FrlM; 'cell envelope and cellular processes; Transport/binding proteins and lipoproteins'.
 
  
 0.987
frlO
FrlO; 'cell envelope and cellular processes; Transport/binding proteins and lipoproteins'.
 
  
 0.984
yurJ
Putative multiple sugar ABC transporter (ATP-binding protein).
  
  
 0.864
frlR
FrlR; 'information pathways; RNA synthesis; Regulation'.
 
  
 0.762
fruC
Fructokinase FruC; 'intermediary metabolism; Metabolism of carbohydrates and related molecules; Specific pathways'.
  
     0.617
hisA
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.
  
    0.558
rbsB
Ribose ABC transporter (ribose-binding lipoprotein).
 
  
 0.445
rbsD
Ribose ABC transporter (membrane bound ribose binding).
 
  
 0.440
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.