Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
tcyKCystine ABC transporter (binding protein); L-cystine-binding protein tcyJ; Flags: Precursor;, Extracellular solute-binding protein, family 3, Bacterial extracellular solute-binding proteins, family 3. (270 aa)    
Predicted Functional Partners:
tcyL
Inner membrane amino-acid ABC transporter permease protein yecS;, Binding-protein-dependent transport systems inner membrane component, Binding-protein-dependent transport system inner membrane component, ectoine_ehuC: ectoine/hydroxyectoine ABC transporter, permease protein EhuC.
 0.996
tcyM
L-cystine transport system permease protein tcyM;, Binding-protein-dependent transport systems inner membrane component, Binding-protein-dependent transport system inner membrane component.
 0.995
tcyN
Cystine ABC transporter (ATP-binding protein); Phosphate import ATP-binding protein pstB; Phosphate-transporting ATPase; ABC phosphate transporter;, ABC transporter-like, ABC transporter, ectoine_ehuA: ectoine/hydroxyectoine ABC transporter, ATP-binding protein.
 
 0.994
tcyJ
Cystine ABC transporter (binding protein); L-cystine-binding protein tcyJ; Flags: Precursor;, Extracellular solute-binding protein, family 3, Bacterial extracellular solute-binding proteins, family 3, 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein.
 
 
 
0.992
ytmI
Putative N-acetyltransferase.
 
    0.949
ytnJ
Putative monooxygenase.
 
  
 0.894
ytnI
Putative redoxin.
  
    0.857
yxeN
Similar to amino acid ABC transporter (permease); Nopaline transport system permease protein nocM;, Binding-protein-dependent transport systems inner membrane component, Binding-protein-dependent transport system inner membrane component, HEQRo_perm_3TM: amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.
 
 0.843
artQ
High affinity arginine ABC transporter (permease); 'cell envelope and cellular processes; Transport/binding proteins and lipoproteins', arginine uptake.
 
 0.841
tcyB
Inner membrane amino-acid ABC transporter permease protein yecS;, Binding-protein-dependent transport systems inner membrane component, Binding-protein-dependent transport system inner membrane component, HEQRo_perm_3TM: amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.
 
 0.819
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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