STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yvbJConserved hypothetical protein. (593 aa)    
Predicted Functional Partners:
yvbI
Putative permease.
 
    0.794
rapA
Response regulator aspartate phosphatase.
  
     0.750
rapJ
Response regulator aspartate phosphatase H; PSP28;, Tetratricopeptide-like helical.
  
    0.741
rapC
Response regulator aspartate phosphatase J;, Tetratricopeptide-like helical.
  
    0.736
rapF
Response regulator aspartate phosphatase J;, Tetratricopeptide region.
  
    0.730
yeeF1
Putative DNA binding protein YeeF fragment; UPF0720 protein yeeF.
  
     0.696
rapD
Response regulator aspartate phosphatase.
  
    0.692
yobI3
Hypothetical protein.
  
     0.679
rapH3
Response regulator aspartate phosphatase.
  
     0.678
ywhK
Factor interacting with DNA helicase PcrA; Uncharacterized protein ywhL;, WD40/YVTN repeat-like-containing domain.
  
     0.675
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.