STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
epsGBiofilm extracellular matrix formation enzyme; Transmembrane protein epsG. (367 aa)    
Predicted Functional Partners:
epsH
Putative glycosyltransferase involved in biofilm formation; Putative glycosyltransferase epsH;, Glycosyl transferase, family 2, Glycosyl transferase family 2.
 
  
 0.995
epsF
Glycogen synthase; Starch [bacterial glycogen] synthase;, Glycosyl transferase, group 1, Glycosyl transferases group 1.
 
    0.984
epsJ
Putative glycosyl transferase EpsJ.
 
  
 0.982
epsK
Putative O-antigen transporter;, Polysaccharide biosynthesis protein.
 
  
 0.973
epsL
Sugar transferases involved in lipopolysaccharide synthesis; Uncharacterized sugar transferase epsL;, Bacterial sugar transferase, Bacterial sugar transferase.
  
  
 0.970
epsE
Putative glycosyltransferase epsE;, Glycosyl transferase, family 2, Glycosyl transferase family 2.
 
  
 0.959
epsD
Glycogen synthase; Starch [bacterial glycogen] synthase;, Glycosyl transferase, group 1, Glycosyl transferases group 1.
 
    0.959
epsI
Putative pyruvyl transferase epsI;, Polysaccharide pyruvyl transferase, Polysaccharide pyruvyl transferase.
 
    0.947
epsC
Putative UDP-sugar epimerase; Capsular polysaccharide biosynthesis protein capD;, Polysaccharide biosynthesis protein CapD-like, Polysaccharide biosynthesis protein.
 
  
 0.936
epsM
Putative acetyltransferase epsM;, Sialic acid O-acyltransferase, NeuD.
  
    0.921
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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