Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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ywjBPutative oxidoreductase; Uncharacterized protein yyaP;, Bacterial bifunctional deaminase-reductase, C-terminal. (176 aa)    
Predicted Functional Partners:
thyB
Thymidylate synthase B.
  
  
 0.891
clpX
Protein unfolding ATPase required for presentation of proteins to proteases.
   
 
 0.721
tetX
Tetracycline resistance protein from transposon Tn4351/Tn4400;, Monooxygenase, FAD-binding.
  
  
 0.559
BAMF_3295
Hydroxyacylglutathione hydrolase; Glyoxalase II; Glx II;, Beta-lactamase-like, Metallo-beta-lactamase superfamily.
       0.535
birA
Biotin acetyl-CoA-carboxylase ligase and biotin regulon repressor.
  
  
 0.483
ribD
Fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase.
     
 0.405
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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