STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Coexpression
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[Homology]
Score
pgdSGamma-DL-glutamyl hydrolase; Poly-gamma-glutamate depolymerase; PGA depolymerase; Flags: Precursor;, NLP/P60, NlpC/P60 family. (411 aa)    
Predicted Functional Partners:
pgsE
Factor required for polyglutamate synthesis; Uncharacterized protein ywtC; Flags: Precursor.
     
 0.873
capB
Poly-gamma-glutamate synthetase; 'other functions; Adaptation to atypical conditions'.
 
   
 0.870
capC
CapC; 'other functions; Adaptation to atypical conditions'.
 
   
 0.869
pgsA3
Capsular polyglutamate synthetase CapA; PGA biosynthesis protein capA;, Capsule synthesis protein, CapA, Bacterial capsule synthesis protein PGA_cap.
 
   
 0.672
rocG
NAD-specific glutamate dehydrogenase; NAD-GDH;, Glutamate/phenylalanine/leucine/valine dehydrogenase, Glutamate/Leucine/Phenylalanine/Valine dehydrogenase.
   
  
 0.632
fliS
Flagellar assembly protein FliS.
 
    0.616
ggt
Membrane bound gamma-glutamyltranspeptidase.
      
 0.611
cwlO
Secreted cell wall DL-endopeptidase; Peptidoglycan DL-endopeptidase cwlO; D-gamma-glutamyl-meso-diaminopimelyl DL-endopeptidase; PSPA2; Flags: Precursor;, NLP/P60, NlpC/P60 family.
 
  
0.586
lytD
Exported N-acetylglucosaminidase (major autolysin) (CWBP90).
  
  
 0.581
glnA
Glutamine synthetase.
     
 0.575
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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