STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ywrDPutative gamma-glutamyltransferase. (525 aa)    
Predicted Functional Partners:
gudB
Cryptic glutamate dehydrogenase.
   
 
 0.936
rocG
NAD-specific glutamate dehydrogenase; NAD-GDH;, Glutamate/phenylalanine/leucine/valine dehydrogenase, Glutamate/Leucine/Phenylalanine/Valine dehydrogenase.
   
 
 0.929
ggt
Membrane bound gamma-glutamyltranspeptidase.
  
  
 
0.922
pepA
Leucyl aminopeptidase.
  
  
 0.922
bsaA
Putative peroxidase.
     
 0.912
yhxA
Similar to adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Glutamate-1-semialdehyde 2,1-aminomutase; GSA; Glutamate-1-semialdehyde aminotransferase; GSA-AT;, Aminotransferase class-III, Aminotransferase class-III, bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase.
    
  0.901
ykqA
Conserved hypothetical protein.
   
 
 0.901
ycsF
Putative nitrogen-containing heterocycle degradation enzyme.
     
  0.900
gltA
Glutamate synthase (large subunit).
     
 0.887
glnA
Glutamine synthetase.
     
 0.823
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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