STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ywlEProtein-tyrosine-phosphatase. (151 aa)    
Predicted Functional Partners:
ywlF
Ribose 5-phosphate epimerase.
 
    0.947
mcsB
Protein arginine kinase, phosphorylates CtsR, modulator of CtsR-dependent repression; Putative ATP:guanido phosphotransferase GK0077;, ATP:guanido phosphotransferase, ATP:guanido phosphotransferase, C-terminal catalytic domain.
  
  
 0.906
mcsA
Activator of protein kinase McsB.
  
   
 0.749
yfkI
Conserved hypothetical protein.
  
    0.667
ywlD
Putative integral inner membrane protein UPF0059 DUF0204 family.
       0.626
ywlC
Putative ribosome maturation factor; Uncharacterized protein ywlC;, Sua5/YciO/YrdC/YwlC, yrdC domain, TIGR00057: Sua5/YciO/YrdC/YwlC family protein.
 
     0.580
baeJ
Bacillaene synthesis; hybrid NRPS/PKS protein.
  
 
 0.566
ywlG
Conserved hypothetical protein.
       0.548
ituA
Iturin A synthetase A (B. subtilis); 'other functions; Antibiotic production; Nonribosomal synthesis of iturinA'.
  
 
 0.541
baeM
Bacillaene synthesis; polyketide synthase of type I.
  
 
 0.536
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.