STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadFPutative iron-sulphur-binding reductase; Uncharacterized protein fadF;, Cysteine-rich region, CCG, Cysteine-rich domain. (702 aa)    
Predicted Functional Partners:
fadN
3-hydroxyacyl-CoA dehydrogenase (acetoacetyl-CoA); 'intermediary metabolism; Metabolism of lipids'.
 
  
 0.803
fadE
acyl-CoA dehydrogenase; 'intermediary metabolism; Metabolism of lipids'.
 
  
 0.777
etfB
Electron transfer flavoprotein (beta subunit).
 
  
 0.760
lutB
Lactate oxidase; Uncharacterized electron transport protein yvfW;, Iron-sulphur cluster binding protein, Uncharacterised ACR, YkgG family COG1556, TIGR00273: iron-sulfur cluster binding protein.
  
 
 0.758
lutC
Lactate catabolic enzyme; UPF0707 protein yvbY;, Protein of unknown function DUF162, Uncharacterised ACR, YkgG family COG1556.
  
 
 0.715
etfA
Electron transfer flavoprotein (alpha subunit).
 
  
 0.649
acdA
acyl-CoA dehydrogenase; Cardiolipin synthetase; Cardiolipin synthase; CL synthase;, Phospholipase D/Transphosphatidylase.
       0.591
fadR
YsiA; 'information pathways; RNA synthesis; Regulation'.
 
  
 0.574
ywjD
Putative UV damage repair endonuclease.
       0.525
rpoE
RNA polymerase (delta subunit).
     
 0.495
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.