STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBAM_034760Spermidine/putrescine import ATP-binding protein potA;, ABC transporter-like, ABC transporter, drrA: daunorubicin resistance ABC transporter, ATP-binding protein. (306 aa)    
Predicted Functional Partners:
RBAM_034770
RBAM_034770.
 
 
 0.928
RBAM_034740
Uncharacterized protein X;, Winged helix repressor DNA-binding, Transcriptional regulator PadR-like family.
 
    0.665
yhcI
Similar to ABC transporter (membrane protein).
 
 
 0.629
ydbK
Putative efflux ABC-transporter (permease component).
 
 
 0.613
RBAM_034750
Hypothetical protein RBAM_034750; Protein of unknown function DUF1700, Protein of unknown function (DUF1700).
  
    0.528
rplNA
Ribosomal protein L14.
  
    0.483
yvcC
Lipid A export ATP-binding/permease protein msbA;, ABC transporter-like, ABC transporter, MsbA_rel: ABC transporter, permease/ATP-binding protein.
  
 
0.412
yheH
ATP-binding cassette, subfamily B, multidrug efflux pump; ABC transporter (ATP-binding protein) involved in the signalling pathway that activates KinA during sporulation initiation.
  
 
0.412
uppS
Undecaprenyl pyrophosphate synthase.
 
     0.404
yheI
ATP-binding cassette, subfamily B, multidrug efflux pump; Lipid A export ATP-binding/permease protein msbA;, ABC transporter integral membrane type 1, ABC transporter, MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA.
  
 
0.402
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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