BAMF_3753 protein (Bacillus amyloliquefaciens DSM 7 ATCC 23350)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

BAMF_3753

Putative endonuclease, Z1 domain. (891 aa)

Predicted Functional Partners:

BAMF_3754

0.964

BAMF_3752

0.962

BAMF_3755

0.961

ddeM

0.884

guaB

0.842

yokH

0.829

ynaB

0.829

htpG

0.821

rtpA

0.794

dnaJ

0.794

Your Current Organism:

Bacillus amyloliquefaciens DSM 7 ATCC 23350

NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAMF_3752	BAMF_3753	BAMF_3752	BAMF_3753	Chaperone protein htpG; Heat shock protein htpG; High temperature protein G;, ATP-binding region, ATPase-like.	Putative endonuclease, Z1 domain.	0.962
BAMF_3752	BAMF_3754	BAMF_3752	BAMF_3754	Chaperone protein htpG; Heat shock protein htpG; High temperature protein G;, ATP-binding region, ATPase-like.	Conserved hypothetical protein.	0.955
BAMF_3752	BAMF_3755	BAMF_3752	BAMF_3755	Chaperone protein htpG; Heat shock protein htpG; High temperature protein G;, ATP-binding region, ATPase-like.	UvrABC system protein B; Protein uvrB; Excinuclease ABC subunit B; Protein dinA;, Abortive phage infection.	0.962
BAMF_3752	ddeM	BAMF_3752	BAMF_3751	Chaperone protein htpG; Heat shock protein htpG; High temperature protein G;, ATP-binding region, ATPase-like.	DNA (cytosine-5)-methyltransferase CMT3; Chromomethylase 3; Protein CHROMOMETHYLASE 3;, DNA methylase, C-5 cytosine-specific, C-5 cytosine-specific DNA methylase, dcm: DNA-cytosine methyltransferase.	0.875
BAMF_3753	BAMF_3752	BAMF_3753	BAMF_3752	Putative endonuclease, Z1 domain.	Chaperone protein htpG; Heat shock protein htpG; High temperature protein G;, ATP-binding region, ATPase-like.	0.962
BAMF_3753	BAMF_3754	BAMF_3753	BAMF_3754	Putative endonuclease, Z1 domain.	Conserved hypothetical protein.	0.964
BAMF_3753	BAMF_3755	BAMF_3753	BAMF_3755	Putative endonuclease, Z1 domain.	UvrABC system protein B; Protein uvrB; Excinuclease ABC subunit B; Protein dinA;, Abortive phage infection.	0.961
BAMF_3753	ddeM	BAMF_3753	BAMF_3751	Putative endonuclease, Z1 domain.	DNA (cytosine-5)-methyltransferase CMT3; Chromomethylase 3; Protein CHROMOMETHYLASE 3;, DNA methylase, C-5 cytosine-specific, C-5 cytosine-specific DNA methylase, dcm: DNA-cytosine methyltransferase.	0.884
BAMF_3753	dnaJ	BAMF_3753	BAMF_2443	Putative endonuclease, Z1 domain.	Co-factor of molecular chaperone.	0.794
BAMF_3753	guaB	BAMF_3753	BAMF_0009	Putative endonuclease, Z1 domain.	Inosine-monophosphate dehydrogenase.	0.842
BAMF_3753	htpG	BAMF_3753	BAMF_3792	Putative endonuclease, Z1 domain.	Class III heat-shock protein (molecular chaperone).	0.821
BAMF_3753	rtpA	BAMF_3753	BAMF_0228	Putative endonuclease, Z1 domain.	Tryptophan RNA-binding attenuator protein-inhibitory protein; Anti-TRAP protein; AT.	0.794
BAMF_3753	ynaB	BAMF_3753	BAMF_1819	Putative endonuclease, Z1 domain.	Putative phage protein.	0.829
BAMF_3753	yokH	BAMF_3753	BAMF_1270	Putative endonuclease, Z1 domain.	Hypothetical protein YokH; 'other functions; Phage-related functions'.	0.829
BAMF_3754	BAMF_3752	BAMF_3754	BAMF_3752	Conserved hypothetical protein.	Chaperone protein htpG; Heat shock protein htpG; High temperature protein G;, ATP-binding region, ATPase-like.	0.955
BAMF_3754	BAMF_3753	BAMF_3754	BAMF_3753	Conserved hypothetical protein.	Putative endonuclease, Z1 domain.	0.964
BAMF_3754	BAMF_3755	BAMF_3754	BAMF_3755	Conserved hypothetical protein.	UvrABC system protein B; Protein uvrB; Excinuclease ABC subunit B; Protein dinA;, Abortive phage infection.	0.966
BAMF_3754	ddeM	BAMF_3754	BAMF_3751	Conserved hypothetical protein.	DNA (cytosine-5)-methyltransferase CMT3; Chromomethylase 3; Protein CHROMOMETHYLASE 3;, DNA methylase, C-5 cytosine-specific, C-5 cytosine-specific DNA methylase, dcm: DNA-cytosine methyltransferase.	0.840
BAMF_3755	BAMF_3752	BAMF_3755	BAMF_3752	UvrABC system protein B; Protein uvrB; Excinuclease ABC subunit B; Protein dinA;, Abortive phage infection.	Chaperone protein htpG; Heat shock protein htpG; High temperature protein G;, ATP-binding region, ATPase-like.	0.962
BAMF_3755	BAMF_3753	BAMF_3755	BAMF_3753	UvrABC system protein B; Protein uvrB; Excinuclease ABC subunit B; Protein dinA;, Abortive phage infection.	Putative endonuclease, Z1 domain.	0.961

page 1 of 3

Server load: low (12%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About