STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAMF_3891Hydrolase, alpha/beta fold family; 2-hydroxy-6-oxononadienedioate/2-hydroxy-6- oxononatrienedioate hydrolase 1; 2-hydroxy-6-oxonona-2,4-diene-1,9-dioic acid 5,6-hydrolase 1; 2-hydroxy-6-ketonona-2,4-diene-1,9-dioic acid 5,6-hydrolase 1; 2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioic acid 5,6-hydrolase 1;, Alpha/beta hydrolase fold-1, alpha/beta hydrolase fold. (281 aa)    
Predicted Functional Partners:
baeJ
Bacillaene synthesis; hybrid NRPS/PKS protein.
  
 0.893
baeM
Bacillaene synthesis; polyketide synthase of type I.
  
 0.707
ituA
Iturin A synthetase A (B. subtilis); 'other functions; Antibiotic production; Nonribosomal synthesis of iturinA'.
  
 
 0.667
BAMF_0507
Abhydrolase domain-containing protein 7; Epoxide hydrolase-related protein;, Alpha/beta hydrolase fold-1, alpha/beta hydrolase fold.
  
     0.603
baeL3
Bacillaene synthesis; Putative polyketide synthase pksM;, Beta-ketoacyl synthase, Beta-ketoacyl synthase, N-terminal domain.
  
 0.566
cypB
Cytochrome P450 CYP102A3.
 
 0.466
yetO
Putative cytochrome P450 CYP102A2.
 
 0.457
tetX
Tetracycline resistance protein from transposon Tn4351/Tn4400;, Monooxygenase, FAD-binding.
  
 
 0.412
Your Current Organism:
Bacillus amyloliquefaciens DSM 7 ATCC 23350
NCBI taxonomy Id: 692420
Other names: B. amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens ATCC 23350, Bacillus amyloliquefaciens DSM 7, Bacillus amyloliquefaciens DSM 7 = ATCC 23350, Bacillus amyloliquefaciens str. DSM 7, Bacillus amyloliquefaciens strain DSM 7
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