STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BG36_08050Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (201 aa)    
Predicted Functional Partners:
BG36_11755
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.448
BG36_12270
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.425
BG36_22880
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.423
BG36_23260
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.419
BG36_17310
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.417
BG36_08055
Multidrug MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.
       0.405
BG36_08060
Secretion protein HylD; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.405
BG36_08065
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.405
Your Current Organism:
Aquamicrobium defluvii
NCBI taxonomy Id: 69279
Other names: A. defluvii, CIP 105610, DSM 11603, strain NKK
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.