STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BG36_22940Magnesium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (85 aa)    
Predicted Functional Partners:
BG36_10745
DNA processing protein DprA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.840
BG36_05865
Amidophosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.799
ruvC
Holliday junction resolvase; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
  
   
 0.726
BG36_10540
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.708
flgF
Flagellar basal body rod protein FlgF; FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.592
BG36_14605
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0102 family.
 
  
 0.480
BG36_07715
DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.474
BG36_20365
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.450
BG36_20400
Flagellar basal-body rod protein FlgG; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family.
   
   0.450
BG36_22950
Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.422
Your Current Organism:
Aquamicrobium defluvii
NCBI taxonomy Id: 69279
Other names: A. defluvii, CIP 105610, DSM 11603, strain NKK
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.