STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N409_GASACSi:dkey-43k4.5; Belongs to the potassium channel family. (425 aa)    
Predicted Functional Partners:
G3PH76_GASAC
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.924
G3PAN0_GASAC
Potassium voltage-gated channel, subfamily G, member 1; Belongs to the potassium channel family.
    
 0.882
G3NZF9_GASAC
Uncharacterized protein.
      
 0.846
G3N8U9_GASAC
Potassium voltage-gated channel, Shab-related subfamily, member 1; Belongs to the potassium channel family.
    
  0.844
KCNB2
Potassium voltage-gated channel subfamily B member 2; Belongs to the potassium channel family.
    
  0.844
KCNS2
Potassium voltage-gated channel modifier subfamily S member 2; Belongs to the potassium channel family.
    
  0.777
G3P5Q2_GASAC
Potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3b; Belongs to the potassium channel family.
    
  0.777
G3N5F7_GASAC
Potassium inwardly-rectifying channel, subfamily J, member 13.
      
 0.749
G3NZ68_GASAC
Ubiquitin A-52 residue ribosomal protein fusion product 1.
  
 0.731
G3NFG6_GASAC
Ribosomal protein L21.
  
 0.717
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.