Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3N413_GASACMatrilin 4. (805 aa)    
Predicted Functional Partners:
G3Q8G8_GASAC
Lumican.
   
 0.809
G3PC60_GASAC
Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family.
   
 0.673
G3PTS1_GASAC
Furin (paired basic amino acid cleaving enzyme) a; Belongs to the peptidase S8 family.
   
 0.673
MFAP2
Microfibril associated protein 2.
   
 0.662
G3P218_GASAC
Uncharacterized protein.
   
 0.630
G3PH53_GASAC
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.625
G3PQY8_GASAC
Integrin beta; Belongs to the integrin beta chain family.
    
 0.602
G3N415_GASAC
LAG1_DNAbind domain-containing protein.
   
 0.591
G3PTN1_GASAC
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.587
G3NIY0_GASAC
AT rich interactive domain 4A (RBP1-like).
    
 0.586
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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