Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3N415_GASACLAG1_DNAbind domain-containing protein. (216 aa)    
Predicted Functional Partners:
G3Q3H5_GASAC
Uncharacterized protein.
   
 0.992
G3PFG0_GASAC
Nuclear receptor corepressor 2.
    
 0.988
G3NP39_GASAC
SNW domain containing 1.
   
 0.986
G3NWL5_GASAC
Hairy-related 9.
    
 0.984
G3P3Q8_GASAC
Hairy-related 6.
    
 0.984
CIR1
Corepressor interacting with RBPJ, 1.
    
 0.980
G3PTY8_GASAC
Uncharacterized protein.
    
 0.980
G3N890_GASAC
Si:ch1073-335m2.2.
    
 0.977
G3NP06_GASAC
Spen family transcriptional repressor.
    
 0.977
G3NW49_GASAC
Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
   
 0.974
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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