STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N415_GASACLAG1_DNAbind domain-containing protein. (216 aa)    
Predicted Functional Partners:
G3PXI1_GASAC
Mastermind-like transcriptional coactivator 1.
   
 0.984
G3PEM7_GASAC
MamL-1 domain-containing protein.
   
 0.937
G3PFG0_GASAC
Nuclear receptor corepressor 2.
    
 0.928
G3Q3H5_GASAC
Uncharacterized protein.
   
 0.927
G3QA56_GASAC
Uncharacterized protein.
    
 0.927
G3P6A0_GASAC
Notch receptor 3.
    
 0.923
G3PFU6_GASAC
Notch receptor 2.
    
 0.923
G3PLH6_GASAC
Notch receptor 1b.
   
 0.921
G3PUD0_GASAC
Notch receptor 1a.
    
 0.920
CIR1
Corepressor interacting with RBPJ, 1.
    
 0.914
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.