Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3N423_GASACZinc finger and BTB domain containing 44. (578 aa)    
Predicted Functional Partners:
G3PF08_GASAC
Uncharacterized protein.
    
 
 0.840
G3NTV5_GASAC
SET and MYND domain containing 1b.
    
 
 0.778
G3Q3K7_GASAC
Uncharacterized protein.
    
 
 0.778
G3NKT1_GASAC
Lactamase, beta-like 1b.
   
 
 0.701
G3PAB9_GASAC
Uncharacterized protein.
    
 
 0.653
G3ND29_GASAC
Zinc finger, SWIM-type containing 8.
      
 0.637
G3Q9S9_GASAC
Exocyst complex component 3-like 2a.
      
 0.634
G3NAI4_GASAC
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
      
 0.621
G3PKP1_GASAC
Mitochondrial ribosomal protein S14.
      
 0.619
G3Q4G7_GASAC
Decapping enzyme, scavenger.
      
 0.614
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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