Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
G3N428_GASACADAM metallopeptidase with thrombospondin type 1 motif, 15b. (876 aa)    
Predicted Functional Partners:
G3NVP6_GASAC
Aggrecan b.
    
 0.555
G3NQL0_GASAC
Thrombospondin 2a.
    
 0.544
G3NRJ0_GASAC
Thrombospondin 1a.
    
 0.544
G3NYN7_GASAC
Thrombospondin 1b.
    
 0.544
G3NT88_GASAC
Protein O-fucosyltransferase 2.
     
 0.534
G3ND35_GASAC
Upstream transcription factor 2, c-fos interacting.
    
 
 0.526
USF2
Upstream transcription factor 2, c-fos interacting.
    
 
 0.526
G3NTK9_GASAC
ADAM metallopeptidase with thrombospondin type 1 motif, 16.
     
 0.520
G3PMV3_GASAC
ADAM metallopeptidase with thrombospondin type 1 motif, 18.
     
 0.520
G3PEJ6_GASAC
ADAM metallopeptidase with thrombospondin type 1 motif, 13.
     
 0.508
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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