STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3N437_GASACProtein tyrosine phosphatase receptor type T. (1449 aa)    
Predicted Functional Partners:
G3NRM5_GASAC
Catenin (cadherin-associated protein), beta 1.
    
 0.889
G3NRF1_GASAC
Uncharacterized protein.
    
 0.883
CTNND1
Catenin delta 1.
    
  0.858
G3Q3F0_GASAC
Catenin (cadherin-associated protein), delta 1.
    
  0.858
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.760
G3NB77_GASAC
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 3b.
   
  0.731
G3ND14_GASAC
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b.
   
  0.731
G3P094_GASAC
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a.
   
  0.731
G3PVZ0_GASAC
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
   
  0.731
G3NVJ9_GASAC
Receptor tyrosine kinase-like orphan receptor 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. ROR subfamily.
    
 0.688
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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